Zoonomia Project: Genomes of hundreds of mammals give clear clues about their evolution

Armstrong, J., Hickey, G., Diekhans, M., Fiddes, I. T., Novak, A. M., Deran, A., Fang, Q Xie, D., Feng, S., Stiller, J., Genereux, D., Johnson, J., Marinescu, V., Alföldi, J., Harris, R., Lindblad-Toh, K., Haussler, D., Karlsson, E., Jarvis, E., Zhang, G., Paten, B. (2020). Progressive Cactus is a multiple-genome aligner for the thousand-genome era. Nature, 587(7833), 246-251.

Foley, N. M., Mason, V. C., Harris, A. J., Bredemeyer, K. R., Damas, J., Lewin, H. A., Eizirik, E., Gatesy, J., Karlsson, E. K., Lindblad-Toh, K., Zoonomia Consortium., Springer, M. S. Murphy, W. J. (2023). A genomic timescale for placental mammal evolution. Science, 380(6643), eabl8189. https://doi.org/10.1126/science.abl8189

Zoonomia Consortium (2020). A comparative genomics multitool for scientific discovery and conservation. Nature, 587(7833), 240-245. https://doi.org/10.1038/s41586-020-2876-6

GenoTropics (2023). GenoTropics: Adaptive genomics for neotropical species. https://www.genotropics.org/

Huddart, J. E., Crawford, A. J., Luna-Tapia, A. L., Restrepo, S., Di Palma, F. (2022). EBP-Colombia and the bioeconomy: Genomics in the service of biodiversity conservation and sustainable development. Proceedings of the National Academy of Sciences, 119(4), e2115641119.

Romero, I. G. (2023). Seeing humans through an evolutionary lens. Science, 380 (6643), 360-361.

Upham, N. S., Landis, M. J. (2023). Genomics expands the mammalverse. Science, 380(6643), 358-359.

Yang, Z. (2007). PAML 4: phylogenetic analysis by maximum likelihood. Molecular Biology and Evolution, 24(8), 1586-1591.

Zoonomia (2023). Zoonomia Project. https://zoonomiaproject.org/the-project/